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Journal Publications 2011

  1. Bianchi, G., Gardner, R.J. and Kiderlen, M. (2011): Phase retrieval for characteristic functions of convex bodies and reconstruction from covariograms. J. Amer. Math. Soc. 24,  293-343.
  2. Birkedal, V., Dong, M., Golas, M.M., Sander, B., Andersen, E.S., Gothelf, K.V., Besenbacher, F. and Kjems, J. (2011): Single molecule microscopy methods for the study of DNA origami structures. Microscopy Research and Technique 74, 688-698.
  3. Boyce, R.W., Dorph-Petersen, K.-A., Lyck, L. and Gundersen, H.J.G. (2011): Stereological solutions for common quantitative endpoints in neurotoxicology. Chapter 15 in Fundamental Neuropathology for Pathologist and Toxicologists: Principles and Techniques. Eds. B. Bolon & M.T. Butt. J Wiley and Sons, Hoboken, 209-228.
  4. Brandt, S., Karemore, G.R., Karssemeijer, N. and Nielsen, M. (2011): An anatomically oriented breast coordinate system for mammogram analysis. IEEE Transactions on Medical Imaging 30, 1841-1851.
  5. Crimi, A., Lillholm, M., Nielsen, M., Ghosh, A., de Bruijne, M., Dam, E.B. and Sporring, J. (2011): Maximum á posteriori estimation of linear shape variation with application to vertebra and cartilage modeling. IEEE Transactions on Medical Imaging 30, 1514-1526.
  6. Cullen-McEwen, L.A., Armitage, J.A., Nyengaard, J.R., Moritz, K.M. and Bertram, J.F. (2011): A design-based method for estimating glomerular number in the developing kidney. American Journal of Physiology: Renal Physiology (16 March, 2011). DOI 10.1152/ajprenal.00055.2011.
  7. Darkner, S., Hansen, M.S., Larsen, R. and Hansen, M.F. (2011): Efficient hyperelastic regularization for registration. In: Lecture Notes in Computer Science 6688, 295-305.
  8. Darkner, S. and Sporring, J. (2011): Generalized partial volume: An inferior density estimator to Parzen windows for normalized mutual information. In: Information Processing in Medical Imaging - 22nd International Conference, IPMI 2011. Eds. Gábor Székely and Horst K. Hahn. Springer Lecture Notes in Computer Science 6801, pp. 436-447.
  9. Feragen, A., Hauberg, S., Nielsen, M. and Lauze, F.B. (2011): Means in spaces of treelike shapes. In: International Conference of Computer Vision 2011, 736-746.
  10. Feragen, A., Lo, P., Gorbunova, V., Nielsen, M., Dirksen, A., Reinhardt, J., Lauze, F.B. and de Bruijne, M. (2011): An airway tree-shape model for geodesic airway branch labeling. In: Mathematical Foundations of Computational Anatomy: Workshop at MICCAI 2011, the 14th International Conference on Medical Image Computing and Computer Assisted Intervention.
  11. Fioretto, E.T., Rahal, S.C., Borges, A.S., Mayhew, T.M., Nyengaard, J.R., Marcondes, J.S., de Carvalho Baliero, J.C., Teixeira, C.R., Melo, M.P., Lobo Ladd, F.V., Lobo Ladd, A.A.B., de Lima, A.R., da Silva, A.A.P. and Coppi, A.A. (2011): Hypertrophy and neuron loss: Structural changes in sheep CSG induced by unilateral sympathectory. International Journal of Developmental Neuroscience 29, 475-481.
  12. Ganz, M., Nielsen, M. and Brandt, S. (2011): Patch-based generative shape model and MDL model selection for statistical analysis of archipelagos. Machine Learning in Medical Imaging 6357. Lecture Notes in Computer Science, p. 34.
  13. Goodey, P., Kiderlen, M. and Weil, W. (2011):  Spherical projections and liftings in geometric tomography. Adv. Geom. 11,  1-47.
  14. Hagensen, M.K., Raarup, M.K., Mortensen, M.B., Thim, T., Nyengaard, J.R., Falk, E., and Bentzon, J.F. (2011): Circulating endothelial progenitor cells do not contribute to generation of endothelium after murine arterial injury. Cardiovascular Research (19 October, 2011). DOI 10.1093/cvr/cvr278.
  15. Hahn, U. (2011): A studentized permutation test for the comparison of spatial point patterns. To appear on J. Amer. Statist. Assoc.
  16. Hansen, L.V., Kiderlen, M. and Jensen, E.B.V. (2011): Image-based empirical
    importance sampling: an efficient way of estimating intensities. Scand. J. Statist. 38, 393-408.
  17. Hansen. L.V., Nyengaard, J.R., Andersen, J.B. and Jensen, E.B.V. (2011): The semi-automatic nucleator. J. Microsc. 242, 206-215.
  18. Kamper, P., Bendix, K., Hamilton-Dutoit, S., Honoré, B., Nyengaard, J.R. and D'Amore, F. (2011): Tumor-infiltrating macrophages correlate with adverse prognosis and Eptsein-Barr virus status in classical Hodgkin's lymphoma. Haematologica 96, 269-276.
  19. Kamper, P., Ludvigsen, M., Bendix, K., Hamilton-Dutoit, S.J., Rabinovich, G., Møller, M., Nyengaard, J.R., Honoré, B., and D'Amore, F.A. (2011): Proteomic analysis identifies galectin-1 as a predictive biomarker for relapsed/refractory desease in classical Hodgkin lymphoma. Blood 117, 6638-6649.
  20. Kraugerud, M., Aleksandersen, M., Nyengaard, J.R., Ostby, G.C., Gutleb, A.C., Dahl, E., Farstad, W., Schweder, T., Skaare, J.U., Ropstad, E. and Berg, V. (2011): In utero and lactational exposure to PCB 118 and PCB 153 alter ovarian follicular dynamics and GnRH-induced luteinizing hormone secretion in female lambs. Environmental Toxicology (22 February, 2011). DOI 10.1002/tox.20679.
  21. Møller, J. (2011): Contribution to the discussion of Lindgren, F., Rue, H. and Lindstrøm, J. (2011): An explicit link between Gaussian fields and Gaussian Markov random fields: The stochastic partial differential equation approach. To appear in J. Roy. Statist. Soc. B 73.
  22. Møller, J. and Yiu, M.L. (2011): Probabilistic results for a mobile service scenario. Adv. Appl. Prob. 43, 322-334.
  23. Pedersen, M., Karstoft, K., Lødrup, A., Jespersen, B. and Nyengaard, J.R. (2011): Advantages and controversies in the era of intrarenal volumetry. American Journal of Nephrology 33, 40-45.
  24. Petersen, J., Nielsen, M.,  Lo, P.C.P., Saghir, Z., Dirksen, A. and de Bruijne, M. (2011): Optimal graph based segmentation using flow lines with application to airway wall segmentation. In: Information Processing in Medical Imaging - 22nd International Conference, IPMI 2011. Eds. Gábor Székely and Horst K. Hahn. Springer Lecture Notes in Computer Science 6801, pp. 49-60.
  25. Riber-Hansen, R., Nyengaard, J.R., Hamilton-Dutois, S.J., Sjoegren, P. and Steiniche, T. (2011): Automated digital volume measurement of melanoma metastases in sentinel nodes predicts desease recurrence and survival. Histopathology 59, 433-440.
  26. Sander, B. and Golas, M.M. (2011): Visualization of bionanostructures using tramsmission electronmicroscopial techniques. Microscopy Research and Technique 74, 642-663.
  27. Schlafer, S., Raarup, M.K., Meyer, R.L., Sutherland, D.S., Dige, I., Nyengaard, J.R. and Nyvad, B. (2011): pH landscapes in a novel five-species model of early dental biofilm. P L o S One (20 September, 2011). DOI 10.1371/journal.pone.0025299.
  28. Sommer, S.H. (2011): Accelerating multi-scale flows for LDDKBM diffeomorphic registration. In: GUPCV workshop at ICCV 2011. IEEE/ACM, pp. 499-505.
  29. Sommer, S.H., Lauze, F.B., Nielsen, M. and Pennec, X. (2011): Kernel bundle EPDiff: Evolution equations for multi-scale diffeomorphic image registration. In: Scale Space and Variational Methods in Computer Vision 2011: Lecture Notes in Computer Science. Springer.
  30. Sommer, S.H., Nielsen, M., Lauze, F.B. and Pennec, X. (2011): A multi-scale kernel bundle for LDDMM: Towards sparse deformation description across space and scales. In: Information Processing in Medical Imaging - 22nd International Conference, IPMI 2011. Eds. Gábor Székely and Horst K. Hahn. Springer Lecture Notes in Computer Science 6801, pp. 624-635.
  31. Stark, A.K., Gundersen, H.J.G., Gardi, J.E. Pakkenberg, B. and Hahn, U. (2011): The saucor, a new stereological tool for analysing the spatial distributions of cells, exemplified by human neocortical neurons and glial cells. J. Microsc. 242, 132-147.
  32. van Es, N., Schulz, A., Ijpelaar, D., van der Wal, A., Kuhn, K., Schütten, S., Kossmehl, P., Nyengaard, J.R., de Heer, E. and Kreutz, R. (2011): Elimination of severe albuminuria in aging hypertensive rats by exchange of 2 chromosomes in double-consomic rats. Hypertension 58, 219-224.
  33. Vaegter, C.B., Jansen, P., Fjorback, A.W., Glerup, S. Skeldal, S., Kjølby, M.F., Richner, M., Erdmann, B., Nyengaard, J.R., Tessarollo, L., Lewin, G.R., Willnow, T.E., Chao, M.V. and Nykjaer, A. (2011): Sortillin associates with Trk receptors to enhance anterograde transport and nuroprophin signaling. Nature Neuroscience 14, 54-61.
  34. Yiu, M.L., Jensen, C.S., Møller, J. and Lu., H. (2011): Design and analysis of a ranking approach to private location-based services. To appear in ACM Transactions on Database Systems.
  35. Ziegel, J., Jensen, E.B.V. and Dorph-Petersen, K.-A. (2011): Variance estimation for generalized Cavalieri estimators. Biometrika 98, 187-198.
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Lars Madsen

Revised 2013.02.08